Information for 7-GCAGACCTGCTGC (Motif 8)

A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A A C T G G T A C C G T A A C T G A C T G A C G T A G T C C G A T A C T G A T G C
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 24.9bp
Average Position of motif in Background74.2 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCAGACCTGCTGC----
--TNTCCTGCTGTGNNG
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCAGACCTGCTGC--
--CCACCTGTTGCAT
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCAGACCTGCTGC----
--TCNCCTGCTGNGNNN
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAGACCTGCTGC--
ANCCACCTGTTGCNC
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAGACCTGCTGC----
--NNTCCTGCTGTGNNN
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCAGACCTGCTGC--
-----CCTGCTGAGH
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAGACCTGCTGC
SNGCACCTGCHS-
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCAGACCTGCTGC
--NCACCTGTN--
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAGACCTGCTGC
CCTCACCTG----
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAGACCTGCTGC
RYHYACCTGB---
 A T C G G T A C C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T