Information for 16-AWCCCATGCTCTG (Motif 18)

G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G
Reverse Opposite:
A G T C C G T A A T C G C T G A A C T G A G T C C T G A A C G T C T A G A C T G A T C G G C A T A C G T
p-value:1e-8
log p-value:-1.939e+01
Information Content per bp:1.814
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif28.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.3 +/- 25.5bp
Average Position of motif in Background41.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AWCCCATGCTCTG---
-TCNCCTGCTGNGNNN
 G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AWCCCATGCTCTG---
-NNTCCTGCTGTGNNN
 G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AWCCCATGCTCTG
-CCCCCTGCTGTG
 G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AWCCCATGCTCTG---
-TNTCCTGCTGTGNNG
 G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AWCCCATGCTCTG-
----CCTGCTGAGH
 G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AWCCCATGCTCTG
GACCCCCCGCTGTG
 A C G T G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AWCCCATGCTCTG-
GGCCYCCTGCTGDGH
 A C G T G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AWCCCATGCTCTG
NNNTCCATCCCATAANN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AWCCCATGCTCTG-
GACCCCCCGCTGCGC
 A C G T G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AWCCCATGCTCTG---
-GACCACGCCCTTATT
 G T C A C G T A A T G C G T A C A G T C G T C A A G C T A C T G A G T C A G C T A T G C C G A T A C T G A C G T A C G T A C G T
A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T