Information for 12-TTGAACAATG (Motif 16)

A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A C G A T A C G T A T C G A G C T C A G T A G T C C G T A C T G A
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.854
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif40.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.1 +/- 32.3bp
Average Position of motif in Background44.7 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TTGAACAATG-----
AATGAACAATGGAATT
 A C G T A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TTGAACAATG
GTTGCGCAAT-
 A C G T A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:TTGAACAATG--
--GAACAATGGN
 A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TTGAACAATG--
--RAACAATGGN
 A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:TTGAACAATG-
--GAACAATGG
 A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G A C G T
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TTGAACAATG-
-VRAACAATGG
 A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TTGAACAATG----
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTGAACAATG-
-VRRACAAWGG
 A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTGAACAATG
GTAAACAAT-
 A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TTGAACAATG--
---GACAATGNN
 A G C T A C G T C T A G G T C A C T G A A T G C G T C A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G