Information for 13-GACCTTAACT (Motif 28)

A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
Reverse Opposite:
G T C A C T A G A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.8 +/- 16.7bp
Average Position of motif in Background65.1 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GACCTTAACT
ATGACCTTGA--
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------GACCTTAACT-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GACCTTAACT
NATGACCTTGA--
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GACCTTAACT
NTGACCTTGA--
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GACCTTAACT
ATGACCTTGAA-
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTAACT
TGACCTTGAV-
 A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTAACT
TGACCTTGAT-
 A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTAACT
TGACCTTGAN-
 A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTAACT
TGACCTYA---
 A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACCTTAACT
GTGACCTT----
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A A G T C A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T