Information for 19-TACACAGACACAT (Motif 25)

C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
Reverse Opposite:
C G T A C G A T C T A G A C G T A C T G A C G T A G T C A C G T A C T G A C G T A T C G A C G T C G T A
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.882
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.7 +/- 21.3bp
Average Position of motif in Background47.8 +/- 45.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TACACAGACACAT
AAAGTAAACAAAAATT-
A C G T A C G T A C G T A C G T C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TACACAGACACAT
AAGTAAACAAA-----
A C G T A C G T A C G T C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACACAGACACAT
---CCAGACRSVB
C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TACACAGACACAT--
CAAATCCAGACATCACA
A C G T A C G T C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TACACAGACACAT
NDGTAAACARRN----
A C G T A C G T A C G T C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TACACAGACACAT
--CACAGN-----
C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TACACAGACACAT
---CCAGACAG--
C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TACACAGACACAT
GTAAACAG------
A C G T C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TACACAGACACAT
AAAAAGTAAACAAACAC--
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TACACAGACACAT
AAAAAGTAAACAAACAC--
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A T A G C C G T A A G T C C G T A A C T G C G T A G T A C C G T A A G T C C G T A C G A T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T