Information for 12-SAGTMCYTRTTTKTWT (Motif 21)

T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T
Reverse Opposite:
G T C A C G A T C G T A T G A C C T G A C G T A C T G A A G C T C G T A C T G A C A T G A C G T C G T A A G T C C G A T A T C G
p-value:1e-10
log p-value:-2.310e+01
Information Content per bp:1.642
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.7 +/- 19.9bp
Average Position of motif in Background34.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-SAGTMCYTRTTTKTWT---
NNTGTTCTTTTTTGTTTACT
 A C G T T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:SAGTMCYTRTTTKTWT--
---------ATTGTTTAN
 T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:SAGTMCYTRTTTKTWT------
------NNANTTTTATTGGNNN
 T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:SAGTMCYTRTTTKTWT
CTGTTCCTGG------
 T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.52
Offset:9
Orientation:forward strand
Alignment:SAGTMCYTRTTTKTWT
---------ATTGTT-
 T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:SAGTMCYTRTTTKTWT---
---------NTTTTATTGG
 T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:SAGTMCYTRTTTKTWT------
-----NTNAATTTTATTGNATT
 T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:SAGTMCYTRTTTKTWT------
--------TTTTTTTTCNNGTN
 T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----SAGTMCYTRTTTKTWT
TTCNAAGTACTTNNNNN---
 A C G T A C G T A C G T A C G T T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:SAGTMCYTRTTTKTWT
----GAATGTTTGTTT
 T A G C C G T A C T A G G C A T G T C A G T A C G A C T G C A T C T G A G A C T C G A T A G C T A C T G C G A T C G T A C A G T
A C G T A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T