Information for 11-AGAAAGGTCA (Motif 19)

C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A T G C A C G T
p-value:1e-10
log p-value:-2.479e+01
Information Content per bp:1.905
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.5 +/- 22.9bp
Average Position of motif in Background55.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--AGAAAGGTCA
ANGNAAAGGTCA
 A C G T A C G T C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--AGAAAGGTCA----
TCTCAAAGGTCACGAG
 A C G T A C G T C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--AGAAAGGTCA----
TCTCAAAGGTCACCTG
 A C G T A C G T C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AGAAAGGTCA
ATCAAGGTCA
 C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:AGAAAGGTCA-
-TCAAGGTCAN
 C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.81
Offset:3
Orientation:forward strand
Alignment:AGAAAGGTCA-
---AAGGTCAC
 C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AGAAAGGTCA----
-CAAAGGTCAAGGG
 C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AGAAAGGTCA-
-CAAAGGTCAG
 C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AGAAAGGTCA
--TRAGGTCA
 C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AGAAAGGTCA-
-TCAAGGTCAT
 C G T A A T C G G T C A G T C A G T C A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T