Information for 10-CAGAAGAATC (Motif 18)

T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C
Reverse Opposite:
T A C G C G T A C G A T A C G T A T G C A G C T G A C T T A G C C G A T A T C G
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.687
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.37%
Number of Background Sequences with motif510.7
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets49.7 +/- 25.2bp
Average Position of motif in Background51.6 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGAAGAATC-
NTTNAGAACAATTA
 A C G T A C G T A C G T T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGAAGAATC
-AGAGGAA--
 T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGAAGAATC
-NGAAGC---
 T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAGAATC-----
TNNAGAACAATANATNN
 A C G T A C G T T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C A C G T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGAAGAATC---
NNTNANAACAATTNNA
 A C G T A C G T A C G T T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGAAGAATC
--NAACAAT-
 T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGAAGAATC----
TTTAGAACAATAAAAT
 A C G T A C G T T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGAAGAATC----
TTAAGAACAATAAATT
 A C G T A C G T T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGAAGAATC-------
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGAAGAATC
---AACAAT-
 T A G C C G T A A T C G C T G A T C G A T A C G T G C A G C T A G C A T A T G C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T