Information for 12-GGGATTTCGTAAG (Motif 16)

A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T C G A T C T G A A T G C A C T G C G T A C G T A C G T A A C G T A G T C A G T C G T A C
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 24.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGATTTCGTAAG
GGGGATTTCC----
 A C G T A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGATTTCGTAAG
GGGAATTTCC----
 A C G T A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGATTTCGTAAG
NGGGGATTTCCC---
 A C G T A C G T A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGATTTCGTAAG
GGGGATTTCC----
 A C G T A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTTCGTAAG
GGGAATTTCC----
 A C G T A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTTCGTAAG
NGGGATTA------
 A C G T A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGGATTTCGTAAG
---ATTGCATAA-
 A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
A C G T A C G T A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGGATTTCGTAAG
---ATTGCGCAAT
 A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
A C G T A C G T A C G T T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPD/MA0836.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGGATTTCGTAAG
---ATTGCGCAAT
 A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
A C G T A C G T A C G T T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T

CEBPB/MA0466.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGGATTTCGTAAG
---ATTGCGCAAT
 A C T G A C T G A C T G C G T A C G A T A C G T C G A T A G T C T A C G G A C T C G T A C G T A A C T G
A C G T A C G T A C G T T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T