Information for 3-TCMAYAWTWTCTW (Motif 2)

A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
Reverse Opposite:
C G A T C G T A A C T G C G T A C G T A C G T A C G A T A C G T C T A G C G A T A C T G A C T G C G T A
p-value:1e-9
log p-value:-2.162e+01
Information Content per bp:1.847
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 19.4bp
Average Position of motif in Background43.1 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCMAYAWTWTCTW-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCMAYAWTWTCTW
ATGGTTCAATAATTTTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCMAYAWTWTCTW
----YSTTATCT-
 A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCMAYAWTWTCTW
----TCTTATCT-
 A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCMAYAWTWTCTW-----
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCMAYAWTWTCTW
AAGTCAGCANTTTTN-
 A C G T A C G T A C G T A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TCMAYAWTWTCTW
NNTNNCAATATTAG---
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TCMAYAWTWTCTW
NNTNNCAATATTAG---
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCMAYAWTWTCTW
HWWGTCAGCAWWTTT--
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCMAYAWTWTCTW
----TCTTATCT-
 A C G T A G T C G T A C C G T A G A T C C G T A C G T A A C G T C G A T A C G T A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T