Information for 3-KRAGRAACGRAMSCCA (Motif 9)

C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A T G C A C G T A C G T A G C T A G T C C T A G A G C T A C G T A G C T A G T C A C G T A G T C G T A C
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 25.4bp
Average Position of motif in Background49.8 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:KRAGRAACGRAMSCCA
--AGAAACGAAAGT--
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:KRAGRAACGRAMSCCA
-CAAAATCGAAACTAA
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A
A C G T T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:KRAGRAACGRAMSCCA
-GAGAACCGAAACTG-
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KRAGRAACGRAMSCCA-
--CGTATCGAAACCAAA
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A A C G T
A C G T A C G T T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KRAGRAACGRAMSCCA
-ATAAACCGAAACCAA
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A
A C G T C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

IRF9/MA0653.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:KRAGRAACGRAMSCCA----
-----AACGAAACCGAAACT
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:KRAGRAACGRAMSCCA
---GAAAMTGAAACT-
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:KRAGRAACGRAMSCCA---
--CTGATCGAAACCAAAGT
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KRAGRAACGRAMSCCA
-GGAAANTGAAACTNA
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:KRAGRAACGRAMSCCA
--TGGAACAGMA----
 C A T G C T A G C G T A A C T G C T G A C G T A C T G A A G T C A C T G C T G A C G T A G T C A T A C G A G T C A G T C C G T A
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T