Information for 1-CGCCTTGAAT (Motif 8)

T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T
Reverse Opposite:
T G C A A G C T A C G T G T A C G T C A C T G A A C T G T A C G G A T C A T C G
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.693
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif645.2
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets52.8 +/- 26.2bp
Average Position of motif in Background51.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTTGAAT
TGACCTTGAN-
 A C G T T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTTGAAT--
NNTNTCATGAATGT
 A C G T A C G T T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGCCTTGAAT--
--CCWGGAATGY
 T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTTGAAT--
GCTGACCTTGAACTN
 A C G T A C G T A C G T T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTTGAAT
ATGACCTTGAA-
 A C G T A C G T T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTTGAAT
TGACCTTGAV-
 A C G T T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGCCTTGAAT--
--NCTGGAATGC
 T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCCTTGAAT--
--CCWGGAATGY
 T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T A C G T A C G T
A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTTGAAT-----
NNNTATTGAATTGNNN
 A C G T T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTTGAAT-
TGACCTTGACCT
 A C G T T A G C C T A G A T G C G T A C G A C T A C G T C A T G G T C A C T G A A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T