Information for 2-ATCTACAAGTBCATCA (Motif 4)

C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
Reverse Opposite:
A G C T A T C G C G T A A C G T A T C G T C G A C T G A A G T C A C G T A C G T A C T G A G C T C G T A A C T G C G T A A C G T
p-value:1e-15
log p-value:-3.600e+01
Information Content per bp:1.807
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.3 +/- 28.2bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATCTACAAGTBCATCA
---TTCAAGGTCAT--
 C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATCTACAAGTBCATCA
AANTTCAAGTGGCTTN
 C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATCTACAAGTBCATCA--
-TATTCAAGGTCATGCGA
 C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATCTACAAGTBCATCA
AAATTCAAGTGGNTTN
 C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ATCTACAAGTBCATCA
-----CAAGGHCANV-
 C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATCTACAAGTBCATCA-----
----ACCGGTTGATCACCTGA
 C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATCTACAAGTBCATCA
AATATACATGTAAAACA
 A C G T C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATCTACAAGTBCATCA
NNNNTGCCAGTGATTG-
 A C G T C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATCTACAAGTBCATCA
AATATACATGTAAAATT
 A C G T C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATCTACAAGTBCATCA
AAGTTCAAGGTCAGC-
 C G T A C G A T G T A C A C G T C T G A A G T C T G C A C G T A A C T G A G C T A C G T A T G C C G T A A C G T A T G C T C G A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T