Information for 9-GCACACACAC (Motif 27)

A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C
Reverse Opposite:
A T C G A G C T T A C G A C G T A C T G C G A T T A C G G A C T T A C G T G A C
p-value:1e-6
log p-value:-1.469e+01
Information Content per bp:1.644
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif12.65%
Number of Background Sequences with motif3718.5
Percentage of Background Sequences with motif7.91%
Average Position of motif in Targets45.9 +/- 26.2bp
Average Position of motif in Background50.2 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----GCACACACAC--
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCACACACAC--
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCACACACAC--
GGACACACCCCC
 A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C A C G T A C G T
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCACACACAC-
-CRCCCACGCA
 A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C A C G T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------GCACACACAC
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCACACACAC-
GCCACRCCCACY
 A C G T A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCACACACAC
GCCACACCCA-
 A C G T A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCACACACAC
GGCCACACCCAN
 A C G T A C G T A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------GCACACACAC
NNNVCTGWGYAAACASN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCACACACAC-
YCCGCCCACGCN
 A C G T A C T G A T G C C T G A A T G C G C T A T G A C T G C A A T G C T C G A T A G C A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A