Information for 6-GTCACACACDCAGCCC (Motif 21)

A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G C T A G A G T C A C G T A T C G G T A C A C T G A C G T A T C G A C G T A C T G A C G T A C T G C G T A A T G C
p-value:1e-8
log p-value:-1.939e+01
Information Content per bp:1.800
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.5 +/- 23.9bp
Average Position of motif in Background52.3 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.71
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTCACACACDCAGCCC
AGCGGCACACACGCAA---
 A C G T A C G T A C G T A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTCACACACDCAGCCC
--CRCCCACGCA----
 A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTCACACACDCAGCCC
-TCACACCT-------
 A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GTCACACACDCAGCCC-
-----ACAAAGGNBCCT
 A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTCACACACDCAGCCC
GGACACACCCCC-----
 A C G T A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GTCACACACDCAGCCC
CGAAGCACACAAAATA---
 A C G T A C G T A C G T A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTCACACACDCAGCCC
AGCAACAGCCGCACC--
 A C G T A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GTCACACACDCAGCCC
-TCACACCT-------
 A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTCACACACDCAGCCC
GGCCACACCCAN-----
 A C G T A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTCACACACDCAGCCC
KTTCACACCT-------
 A C G T A T C G C G A T G T A C G T C A G T A C C G T A A T G C C G T A G T A C C A G T A T G C C G T A C T A G A G T C A G T C A G T C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T