Information for 2-CTGACCGCCTTGC (Motif 2)

G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
Reverse Opposite:
A C T G G A T C C G T A G T C A A C T G A T C G G T A C A T C G C T A G A C G T A G T C C T G A A C T G
p-value:1e-15
log p-value:-3.648e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 28.8bp
Average Position of motif in Background19.0 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGACCGCCTTGC
-TGACCTARTT--
 G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGACCGCCTTGC
-YAACBGCC----
 G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGACCGCCTTGC-
TTGACCTANTTATN
 G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGACCGCCTTGC
CTAATCCTCTT--
 G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGACCGCCTTGC
--GTCCGCCATTA
 G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGACCGCCTTGC
-TGACCYCT----
 G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGACCGCCTTGC
-TGACCTTGAT--
 G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTGACCGCCTTGC
CGACCAACTGCCATGC
 A C G T A C G T A C G T G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTGACCGCCTTGC
CGACCAACTGCCGTG-
 A C G T A C G T A C G T G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGACCGCCTTGC
CCAACTGCCA---
 G T A C A G C T C T A G C G T A A G T C A T G C A C T G A T G C A G T C A C G T A C G T C A T G A G T C
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T