Information for 12-AGAGATGAACCCA (Motif 19)

T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G A C T G A G C T A C G T A G T C C G T A A G C T A G T C A G C T G A T C A C G T
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 14.8bp
Average Position of motif in Background33.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAGATGAACCCA----
TGTCGTGACCCCTTAAT
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGATGAACCCA----
NNANTTGACCCCTNNNN
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGAGATGAACCCA-
--NGATGACGTCAT
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T
A C G T A C G T C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAGATGAACCCA----
-NNCNTGACCCCGCTCT
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAGATGAACCCA--
AAAGATGATGTCATC
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAGATGAACCCA-
--NRRTGACGTCAT
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T
A C G T A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAGATGAACCCA-
----ATCACCCCAT
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGAGATGAACCCA
---ACTGAAACCA
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGAGATGAACCCA----
NNNNTTGACCCCTNNNN
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGAGATGAACCCA-
-AAGATGATGTCAT
 T C G A C A T G C T G A A C T G C T G A C G A T A C T G G T C A C T G A A G T C A T G C A G T C C G T A A C G T
A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T