Information for 2-CCAAATCGGG (Motif 10)

T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G
Reverse Opposite:
A G T C A T G C G T A C A C T G G C T A A G C T G A C T C G A T A C T G A T C G
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.542
Number of Target Sequences with motif195.0
Percentage of Target Sequences with motif20.90%
Number of Background Sequences with motif6134.7
Percentage of Background Sequences with motif13.05%
Average Position of motif in Targets50.3 +/- 26.6bp
Average Position of motif in Background50.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCAAATCGGG
TNCCATATATGG
 A C G T A C G T T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

MF0008.1_MADS_class/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAAATCGGG
CCATATATGG
 T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAAATCGGG--
TNCCATATATGGNA
 A C G T A C G T T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCAAATCGGG
TGCCAA------
 A C G T A C G T T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCAAATCGGG---
TGACCATATATGGTCA
 A C G T A C G T A C G T T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAAATCGGG----
NNTAATCCNGNCNN
 T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G A C G T A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PH0089.1_Isx/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCAAATCGGG--
ACTCCTAATTAGTCGT
 A C G T A C G T A C G T A C G T T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCAAATCGGG
CGTGCCAAG-----
 A C G T A C G T A C G T A C G T T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCAAATCGGG
-CTAATCGNT
 T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCAAATCGGG
GGTGCCAAGT----
 A C G T A C G T A C G T A C G T T A G C T G A C G C T A C T G A T C G A C G A T T G A C C A T G T A C G T C A G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T