Information for 1-TBTGCASACAAYT (Motif 1)

A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T
Reverse Opposite:
C G T A C T A G A C G T A G C T A C T G A C G T A T C G A C G T A C T G A G T C C G T A T A C G C G T A
p-value:1e-16
log p-value:-3.828e+01
Information Content per bp:1.836
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.1 +/- 18.8bp
Average Position of motif in Background58.0 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TBTGCASACAAYT-
ATTTGCATACAATGG
 A C G T A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TBTGCASACAAYT-
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TBTGCASACAAYT
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TBTGCASACAAYT-
TTTGCACACGGCAC
 A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TBTGCASACAAYT
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TBTGCASACAAYT--
CGAAGCACACAAAATA
 A C G T A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TBTGCASACAAYT----
--CTCACACAATGGCGC
 A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TBTGCASACAAYT
NNNVCTGWGYAAACASN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TBTGCASACAAYT
TNTAATTTGCATACNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TBTGCASACAAYT
TNTAATTTGCATACNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G T A C C G T A A T C G C G T A A G T C C T G A C G T A A G C T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T