Information for 6-ATGTTAAAGCAGGATC (Motif 7)

C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A T G C A G T C A G C T A C T G A G T C G C A T A C G T A C G T G T C A C T G A A T G C C G T A A C G T
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.809
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 26.5bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAAAGCAGGATC
TATGCWAATBAV-----
 A C G T C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAAAGCAGGATC
WATGCAAATGAG-----
 A C G T C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAAAGCAGGATC
TATGCAAAT--------
 A C G T C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAAAGCAGGATC
TATGCAAAT--------
 A C G T C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:ATGTTAAAGCAGGATC-
-------ANCAGGATGT
 C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:ATGTTAAAGCAGGATC-
--ADGGYAGYAGCATCT
 C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---ATGTTAAAGCAGGATC
AATATGCAAATT-------
 A C G T A C G T A C G T C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--ATGTTAAAGCAGGATC
TTATGCAAATTA------
 A C G T A C G T C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----ATGTTAAAGCAGGATC
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--ATGTTAAAGCAGGATC
TCNNTTTACAGCGNNNT-
 A C G T A C G T C G T A A C G T A T C G A G C T A C G T C G T A G T C A C G T A A C T G A G T C C T G A C T A G A T C G G T C A A C G T A G T C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T