Information for 2-AGGATCYKGRWST (Motif 2)

C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T
Reverse Opposite:
C G T A A T G C C G T A A G C T A G T C G T C A C T G A A C T G C G T A A C G T A G T C A G T C A G C T
p-value:1e-13
log p-value:-3.000e+01
Information Content per bp:1.846
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 29.7bp
Average Position of motif in Background61.4 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGATCYKGRWST--
AANNATCCGGATGTNN
 A C G T C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGATCYKGRWST
-ACATCCTGNT--
 C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGATCYKGRWST
BCNGGTTCTAGANCN
 A C G T A C G T C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGATCYKGRWST
ACAGGATGTGGT---
 A C G T A C G T C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGGATCYKGRWST
CTACTAGGATGTNNTN--
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGATCYKGRWST
NGGATTAN-----
 C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGGATCYKGRWST
NDCAGGAARTNN----
 A C G T A C G T A C G T C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGATCYKGRWST--
AGGACCCGGAAGTAA
 C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T A C G T A C G T
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A

SPDEF/MA0686.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGGATCYKGRWST-
---ACCCGGATGTA
 C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T A C G T
A C G T A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGATCYKGRWST--
-GGTTCCNNAATTTG
 C T G A A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C T G T C G A C G A T A T C G A C G T A C G T A C G T
A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G