Information for 3-CTCCCAGAGT (Motif 4)

A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T
Reverse Opposite:
C G T A A T G C C G A T T G A C A G C T A T C G C T A G A C T G G T C A A T C G
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.806
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif251.8
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets55.0 +/- 25.6bp
Average Position of motif in Background49.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTCCCAGAGT
GCTCCG-----
 A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCAGAGT---
NNNACCGAGAGTNNN
 A C G T A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCAGAGT---
GNNACCGAGAATNNN
 A C G T A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTCCCAGAGT
CNGTCCTCCC-----
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGAGT---
ATTTCCCAGVAKSCY
 A C G T A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T A C G T A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGAGT
ATTTCCAAGAA-
 A C G T A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGAGT
HTTTCCCASG--
 A C G T A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAGAGT---
TTGACCGAGAATTCC
 A C G T A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCCCAGAGT
TGCCCAGNHW
 A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCCCAGAGT---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A T G C A C G T A G T C A G T C A T G C T C G A A C T G C G T A A T C G C G A T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G