Information for 5-CGCGGCACCGAAC (Motif 11)

T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C
Reverse Opposite:
A T C G A C G T A C G T T G A C T A C G A T C G C G A T A T C G A T G C A T G C T A C G A T G C A C T G
p-value:1e-9
log p-value:-2.274e+01
Information Content per bp:1.644
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif4.74%
Number of Background Sequences with motif736.0
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets51.8 +/- 26.3bp
Average Position of motif in Background49.9 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCGGCACCGAAC
GGGCGGGACC----
 A C G T T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGCGGCACCGAAC--
---GGCCCCGCCCCC
 T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGCGGCACCGAAC
----GCTCCG---
 T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGCGGCACCGAAC-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------CGCGGCACCGAAC
NNGCNCTGCGCGGC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGCACCGAAC-
NNGGCGACACCTCNNN
 A C G T A C G T T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CGCGGCACCGAAC---
----GCTCCGCCCMCY
 T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCGGCACCGAAC--
CCTTCGGCGCCAAAAGG
 A C G T A C G T T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CGCGGCACCGAAC
-GCGCCTGCGCA-
 T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGCGGCACCGAAC
CGCAGCTGCG---
 T G A C T A C G A G T C T A C G T A C G T A G C G C T A T A G C A T G C A C T G T G C A T G C A T A G C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T