Information for 7-GCMTGSTCCWTGCCCT (Motif 9)

C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T
Reverse Opposite:
G C T A C A T G C A T G C T A G T G A C G T C A C G T A A C T G A C T G C T G A T A G C A G T C C G T A A C G T T C A G G T A C
p-value:1e-13
log p-value:-3.043e+01
Information Content per bp:1.628
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif251.9
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets42.8 +/- 20.1bp
Average Position of motif in Background51.6 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCMTGSTCCWTGCCCT-
---TGACCTTTGCCCTA
 C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T A C G T
A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCMTGSTCCWTGCCCT---
---TGGACTTTGNNCTNTG
 C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCMTGSTCCWTGCCCT
--CTGTTCCTGG----
 C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCMTGSTCCWTGCCCT--
---TGGACTTTGNNCTCN
 C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCMTGSTCCWTGCCCT--
---TGACCTTTGCCCTAN
 C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCMTGSTCCWTGCCCT
CGTGGGTGGTCC-------
 A C G T A C G T A C G T C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCMTGSTCCWTGCCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------GCMTGSTCCWTGCCCT
NANAAGGGCGTGGTC--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCMTGSTCCWTGCCCT
--NNGCACCTTTCTCC
 C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T
A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCMTGSTCCWTGCCCT
--NAGGTCANTGACCT
 C A T G A G T C T G C A C G A T C T A G A T C G G A C T G T A C G T A C G C A T A C G T A C T G A G T C G T A C G T A C C G A T
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T