Information for 2-CTGTGACGTGCAT (Motif 5)

A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
Reverse Opposite:
C G T A A G C T A C T G G T A C C G T A A G T C A T C G A C G T A G T C C G T A A G T C C G T A T A C G
p-value:1e-14
log p-value:-3.364e+01
Information Content per bp:1.825
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 24.6bp
Average Position of motif in Background45.1 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTGTGACGTGCAT
----TACGTGCV-
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTGTGACGTGCAT
---RTACGTGC--
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGTGACGTGCAT
-GGGTACGTGC--
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTGTGACGTGCAT
---GGACGTGC--
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTGTGACGTGCAT
--GACACGTGCC-
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTGTGACGTGCAT
---TGACGT----
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGTGACGTGCAT
--ATGACGTA---
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGTGACGTGCAT
-GGTCACGTGC--
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTGTGACGTGCAT
---TCACGTGC--
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGTGACGTGCAT
--GHCACGTG---
 A G T C A C G T A C T G G A C T C T A G C G T A A T G C A C T G A C G T A C T G A G T C C T G A C G A T
A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T