Information for 2-TCAAAGCGGACCCCGC (Motif 6)

A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C A C T G A C T G A T C G A C T G A C G T A G T C G T A C C T A G A G T C A C G T A C G T A G C T A C T G C G T A
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.3 +/- 24.0bp
Average Position of motif in Background67.9 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCAAAGCGGACCCCGC---
--NNANTTGACCCCTNNNN
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCAAAGCGGACCCCGC
---NCGCGGACGTTG-
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCAAAGCGGACCCCGC----
----TATCGACCCCCCACAG
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCAAAGCGGACCCCGC---
---NNNNTGACCCGGCGCG
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCAAAGCGGACCCCGC---
---NNCNTGACCCCGCTCT
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCAAAGCGGACCCCGC---
--NNNNGGTACCCCCCANN
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCAAAGCGGACCCCGC
ACATCAAAGG---------
 A C G T A C G T A C G T A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:8
Score:0.54
Offset:8
Orientation:forward strand
Alignment:TCAAAGCGGACCCCGC------
--------GACCCCCCGCGAAG
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCAAAGCGGACCCCGC------
------TCGACCCCGCCCCTAT
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TCAAAGCGGACCCCGC
------AAGACCCYYN
 A C G T A G T C C T G A G T C A C G T A A C T G A G T C A C T G A C T G C G T A A G T C A T G C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C