Information for 2-CTCTCTCTCT (Motif 4)

A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T
Reverse Opposite:
T G C A A C T G C T G A A T C G G T C A A T C G T C G A T C A G T C G A A C T G
p-value:1e-12
log p-value:-2.935e+01
Information Content per bp:1.732
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif9.79%
Number of Background Sequences with motif1916.9
Percentage of Background Sequences with motif4.05%
Average Position of motif in Targets50.0 +/- 26.1bp
Average Position of motif in Background50.6 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTCTCTCTCT-----
ACCACTCTCGGTCAC
 A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCT
GCTCGGSCTC-
 A C G T A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCT-
ACTTTCACTTTC
 A C G T A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCTCTCTCT-----
AGTATTCTCGGTTGC
 A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCTCT-----
NNAATTCTCGNTNAN
 A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCT--
TCACTTTCACTTTCN
 A C G T A C G T A C G T A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCTCT
CACTTCCTCT
 A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCTCT-
NCTTCCCGCCC
 A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T A C G T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTCTCT
CCCCCGCCCCCGCC
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCTCT
CRCCCACGCA
 A G T C A G C T A G T C A G C T A T G C A C G T A T G C A G C T A G T C A C G T
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A