Information for 1-TTTACTCTCG (Motif 2)

A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
Reverse Opposite:
T G A C A T C G C G T A C T A G G T C A A C T G A C G T C G T A G T C A T G C A
p-value:1e-13
log p-value:-3.161e+01
Information Content per bp:1.761
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif197.7
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets40.2 +/- 25.2bp
Average Position of motif in Background46.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTCTCG
TGTTTACTTT--
 A C G T A C G T A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTCTCG
TGTTTACTTT--
 A C G T A C G T A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------TTTACTCTCG
TCCATGTTTACTTTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTACTCTCG-----
ACCACTCTCGGTCAC
 A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTACTCTCG
TGTTTACTTAGG
 A C G T A C G T A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTACTCTCG
-TTCCTCT--
 A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTACTCTCG
TRTTTACTTW--
 A C G T A C G T A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTTACTCTCG
CNTGTTTACATA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTTACTCTCG
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTACTCTCG-----
NNAATTCTCGNTNAN
 A C G T A C G T C G A T T G C A A G T C A C G T A G T C C G A T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A