Information for 10-TAAAGKCTGRCGG (Motif 8)

A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G
Reverse Opposite:
A T G C G T A C A C T G A G C T A T G C C G T A C T A G T G C A A G T C A C G T A G C T A G C T G T C A
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.770
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif49.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets45.2 +/- 26.3bp
Average Position of motif in Background49.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAAAGKCTGRCGG
--TWGTCTGV---
 A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TAAAGKCTGRCGG------
--NAGANTGGCGGGGNGNA
 A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TAAAGKCTGRCGG--
---TGTCTGDCACCT
 A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAAAGKCTGRCGG
--CTGTCTGG---
 A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TAAAGKCTGRCGG--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL002.1_INR/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TAAAGKCTGRCGG
--NNNANTGA---
 A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAGKCTGRCGG
NGCANTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TAAAGKCTGRCGG--
---TGCCCNGGGGCA
 A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TAAAGKCTGRCGG
--AAGCTTG----
 A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TAAAGKCTGRCGG-
---TGCCTGAGGCN
 A C G T C T G A C T G A C G T A A C T G A C G T A G T C A C G T A T C G C T G A T A G C A C T G A T C G A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T