Information for 7-AAAATGGCGG (Motif 4)

C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G
Reverse Opposite:
A T G C G A T C A C T G A G T C A G T C T G C A A C G T G A C T A C G T A C G T
p-value:1e-15
log p-value:-3.492e+01
Information Content per bp:1.862
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif366.8
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets42.0 +/- 26.2bp
Average Position of motif in Background52.4 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-AAAATGGCGG-
CAAGATGGCGGC
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-AAAATGGCGG-
CAAGATGGCGGC
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:AAAATGGCGG--
-TAATGGCGGNC
 C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGGCGG------
NAGANTGGCGGGGNGNA
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAATGGCGG------
AAAATGGCGCCATTTT
 C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAAATGGCGG-------
AAAAATGGCGCCATTTTT
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAAATGGCGG
AACAGATGGC--
 A C G T A C G T C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAATGGCGG-----
ATAAGGGCGCGCGAT
 C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G A C G T A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGGCGG
AACAAAGG---
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAATGGCGG--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C G T A C G T A C T G A C G T A A C G T A C T G A C T G A G T C C T A G T A C G A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G