Information for 4-GGGAGCTGTCCAT (Motif 3)

A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T
Reverse Opposite:
T C G A A C G T A C T G C T A G C T G A A G T C C G T A A T C G A G T C C A G T A G T C A G T C T A G C
p-value:1e-77
log p-value:-1.781e+02
Information Content per bp:1.776
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif6.50%
Number of Background Sequences with motif67.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets51.8 +/- 17.8bp
Average Position of motif in Background53.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGAGCTGTCCAT--------
-GGAGCTGTCCATGGTGCTGA
 A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGAGCTGTCCAT---------
-GGCGCTGTCCATGGTGCTGAA
 A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGCTGTCCAT---
NNNCAGCTGTCAATATN
 A C G T A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGAGCTGTCCAT--
AAAGACCTGTCAATCC
 A C G T A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGAGCTGTCCAT--
AAGCACCTGTCAATAT
 A C G T A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGAGCTGTCCAT--
AACGAGCTGTCAATAC
 A C G T A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGAGCTGTCCAT--
AAAGACCTGTCAATAC
 A C G T A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGGAGCTGTCCAT
----GCTGTG---
 A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGAGCTGTCCAT--
GGGCGATGACCAYTC
 A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GGGAGCTGTCCAT
----GCTGTCAA-
 A C T G A C T G A C T G G T C A T C A G A T G C A C G T A C T G G A C T A G T C A G T C T G C A A G C T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T