Information for 11-CCGCCGGTGYCCCGTC (Motif 16)

A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C T G A C T G T A C G C T A G A T G C G T C A A G T C A G T C A C T G A C T G A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.900
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.5 +/- 19.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CCGCCGGTGYCCCGTC
TACGCCCCGCCACTCTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCGCCGGTGYCCCGTC
SDGCAGGTGCNS----
 A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGGTGYCCCGTC
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CCGCCGGTGYCCCGTC
-TGCCTGCGYCMCCTT
 A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCGCCGGTGYCCCGTC-
--GYCTGGYYTNTGTCA
 A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGGTGYCCCGTC
NCNCAGCGGGGGGTC----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGGTGYCCCGTC
TTCCCGCCWG---------
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGGTGYCCCGTC
NCCCCCCCGGGGGGN----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.47
Offset:6
Orientation:forward strand
Alignment:CCGCCGGTGYCCCGTC----
------GTGCCACGTCATCA
 A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGGTGYCCCGTC
ACCCCCCCGGGGGGN----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C T G A C T G A C G T A T C G A G C T A G T C A G T C A G T C A C T G A C G T A G T C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T