Information for 6-SSGATTGGCK (Motif 5)

T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G
Reverse Opposite:
T G A C T A C G A G T C A T G C G C T A C T G A A G C T A T G C T A C G A T G C
p-value:1e-18
log p-value:-4.239e+01
Information Content per bp:1.663
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif10.91%
Number of Background Sequences with motif1878.2
Percentage of Background Sequences with motif4.05%
Average Position of motif in Targets52.5 +/- 25.5bp
Average Position of motif in Background48.9 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:SSGATTGGCK
CCGATTGGCT
 T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:SSGATTGGCK---
-TGATTGGCTANN
 T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:SSGATTGGCK-----
CTGATTGGTCNATTT
 T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.77
Offset:4
Orientation:forward strand
Alignment:SSGATTGGCK
----TTGGCA
 T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:SSGATTGGCK--
---NTTGGCANN
 T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------SSGATTGGCK--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:SSGATTGGCK-------
NAGANTGGCGGGGNGNA
 T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--SSGATTGGCK
CNGTGATTTN--
 A C G T A C G T T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:SSGATTGGCK
TTGATTGN--
 T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:SSGATTGGCK--
--NNTTGGCANN
 T A C G A T G C T A C G T C G A G A C T C G A T A T C G A C T G A T G C A C T G A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C