Information for 4-GCRGTGACGTCAC (Motif 3)

A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C
Reverse Opposite:
T A C G A C G T A C T G G C T A T A G C A C T G C G A T T A G C C G T A A G T C G A T C T C A G A T G C
p-value:1e-34
log p-value:-7.994e+01
Information Content per bp:1.656
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif6.46%
Number of Background Sequences with motif360.7
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets57.1 +/- 22.6bp
Average Position of motif in Background48.1 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GCRGTGACGTCAC
-CGGTGACGTCAC
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C
A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.86
Offset:2
Orientation:forward strand
Alignment:GCRGTGACGTCAC
--GATGACGTCA-
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C
A C G T A C G T T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.85
Offset:4
Orientation:forward strand
Alignment:GCRGTGACGTCAC
----TGACGT---
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.85
Offset:4
Orientation:forward strand
Alignment:GCRGTGACGTCAC
----TGACGTCA-
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C
A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:5
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GCRGTGACGTCAC---
ACGATGACGTCATCGA
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C A C G T A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.85
Offset:3
Orientation:forward strand
Alignment:GCRGTGACGTCAC
---ATGACGTA--
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C
A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:7
Score:0.84
Offset:2
Orientation:forward strand
Alignment:GCRGTGACGTCAC
--TATGACGTAA-
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C
A C G T A C G T A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GCRGTGACGTCAC
-NGRTGACGTCAY
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C
A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

PB0038.1_Jundm2_1/Jaspar

Match Rank:9
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GCRGTGACGTCAC---
NCGATGACGTCATCGN
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C A C G T A C G T A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G

Creb5/MA0840.1/Jaspar

Match Rank:10
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GCRGTGACGTCAC-
--NGTGACGTCATN
 A T C G A G T C C T A G T C A G A C G T A T C G C G T A A G T C A T C G C G A T T G A C T G C A A T G C A C G T
A C G T A C G T C T A G T C A G C G A T C A T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T A G C T