Information for 1-RGAACCGGTT (Motif 2)

T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T
Reverse Opposite:
C T G A C T G A A T G C A G T C C T A G A T C G G A C T G C A T A G T C A G T C
p-value:1e-66
log p-value:-1.542e+02
Information Content per bp:1.652
Number of Target Sequences with motif292.0
Percentage of Target Sequences with motif30.93%
Number of Background Sequences with motif4767.8
Percentage of Background Sequences with motif10.29%
Average Position of motif in Targets50.8 +/- 21.4bp
Average Position of motif in Background50.5 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFCP2/MA0145.3/Jaspar

Match Rank:1
Score:0.93
Offset:1
Orientation:forward strand
Alignment:RGAACCGGTT-
-AAACCGGTTT
 T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A C G T
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:RGAACCGGTT--
AAAACCGGTTTT
 T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:RGAACCGGTT---
--ACCCGGATGTA
 T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A C G T A C G T A C G T
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--RGAACCGGTT----
GTACATCCGGATTTTT
 A C G T A C G T T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:RGAACCGGTT----------
NAAACCGGTTNNAACCGGTT
 T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RGAACCGGTT-----------
-AAACYKGTTWDACMRGTTTB
 T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RGAACCGGTT
ACATCCTGNT
 T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RGAACCGGTT--
--BRRCVGTTDN
 T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A C G T A C G T
A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:RGAACCGGTT
--TGTCGGTT
 T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T
A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

ETV5/MA0765.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-RGAACCGGTT
NACTTCCGGT-
 A C G T T C A G T C A G C G T A C T G A A T G C G A T C C T A G A T C G G A C T G A C T
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T A C G T