Information for 14-GCGGGATTAA (Motif 19)

A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
C G A T C G A T C G T A C G T A A C G T A G T C A G T C A G T C A C T G A G T C
p-value:1e-7
log p-value:-1.693e+01
Information Content per bp:1.940
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.5 +/- 16.1bp
Average Position of motif in Background59.0 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GCGGGATTAA-
--GGGATTANN
 A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GCGGGATTAA
--GGGATTAA
 A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PH0122.1_Obox2/Jaspar

Match Rank:3
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GCGGGATTAA----
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GCGGGATTAA----
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---GCGGGATTAA----
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GCGGGATTAA
-NGGGATTA-
 A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATTAA-----
TAGAGGGATTAAATTTC
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GCGGGATTAA-
-VRGGATTARN
 A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATTAA-----
TGTAGGGATTAATTGTC
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GCGGGATTAA
--NGGATTAA
 A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T C G T A C G T A
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A