Information for 13-CCGCCTGACT (Motif 17)

G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T
Reverse Opposite:
T G C A T C A G A G C T A T G C G C T A A C T G A C T G A G T C C T A G A C T G
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.829
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif333.8
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets45.9 +/- 22.9bp
Average Position of motif in Background49.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CCGCCTGACT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGCCTGACT
NCACGTGACN
 G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGACT
NNCACCTGNN-
 A C G T G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGCCTGACT--
GTCATGCHTGRCTGS
 A C G T A C G T A C G T G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCGCCTGACT
CGCCCCCTGACA
 A C G T A C G T G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCTGACT-------
TTTMCGCTTSABTGAACACN
 A C G T A C G T A C G T G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCTGACT
TTCCCGCCWG---
 A C G T A C G T A C G T G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCGCCTGACT
NCACCTGTN-
 G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGCCTGACT
--NCGTGACN
 G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGACT
TACACCTGTC-
 A C G T G T A C A G T C C T A G A G T C A G T C C G A T A T C G T C G A A G T C A C G T
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T