Information for 13-CCGCAAGGGGCGC (Motif 14)

A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G C T C A G T A C T G A G T C A C T G A C T G
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.3 +/- 27.4bp
Average Position of motif in Background69.9 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCGCAAGGGGCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCGCAAGGGGCGC
---NRRGGGTCTT
 A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C
A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCGCAAGGGGCGC------
---NNNGGGGCGCCCCCNN
 A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAAGGGGCGC
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCGCAAGGGGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAAGGGGCGC
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCGCAAGGGGCGC
-NGCCTGAGGCN-
 A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAAGGGGCGC
NCGCAGCGGGGGGTC-
 A C G T A C G T A C G T A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGCAAGGGGCGC
CACCCCCGGGGGGG-
 A C G T A C G T A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGCAAGGGGCGC----
NNNAAGGGGGCGGGNNN
 A G T C G T A C A C T G A G T C G C T A C T G A A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C