Information for 12-CACGGTGGCGCCA (Motif 13)

G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A
Reverse Opposite:
A G C T C T A G A C T G A G T C A C T G A G T C A G T C C T G A A G T C A G T C A C T G C G A T A C T G
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 30.0bp
Average Position of motif in Background81.9 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACGGTGGCGCCA----
NNNNTTGGCGCCGANNN
 G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CACGGTGGCGCCA-----
-AGCTCGGCGCCAAAAGC
 G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CACGGTGGCGCCA
CAAGATGGCGGC-
 G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CACGGTGGCGCCA--
---TTTGGCGCCAAA
 G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACGGTGGCGCCA
CAAGATGGCGGC-
 G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACGGTGGCGCCA----
-AAAATGGCGCCATTTT
 G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CACGGTGGCGCCA---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACGGTGGCGCCA-----
AAAAATGGCGCCATTTTT
 G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CACGGTGGCGCCA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACGGTGGCGCCA----
-TTGGGGGCGCCCCTAG
 G T A C C G T A G T A C A C T G C T A G A G C T A C T G A C T G A G T C C T A G A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G