Information for 11-AGAGCTAACT (Motif 11)

G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T
Reverse Opposite:
G T C A C A T G G A C T C G A T G T C A A T C G G T A C G A C T A T G C A C G T
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.681
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif99.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets38.9 +/- 25.6bp
Average Position of motif in Background55.7 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGAGCTAACT--
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGAGCTAACT----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAGCTAACT
-CAGCC----
 G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGCTAACT-------
AAAGCTAATTAGCGAAA
 G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCTAACT
TTGAGTGSTT---
 A C G T A C G T A C G T G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGAGCTAACT-----
ACTTGCTACCTACACC
 A C G T G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCTAACT
CTYRAGTGSY----
 A C G T A C G T A C G T A C G T G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGAGCTAACT
BTBRAGTGSN----
 A C G T A C G T A C G T A C G T G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAGCTAACT-----
CTGAGCTAATTACCGT
 A C G T G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T A C G T A C G T A C G T A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AGAGCTAACT
GTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G C G T A C A T G A T G C C A G T G C T A C T G A G T A C C A G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T