Information for 7-CGTGAGCTCA (Motif 13)

A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A
Reverse Opposite:
A C G T A C T G G T C A A T C G A T G C C G A T G T A C G T C A G T A C C T A G
p-value:1e-5
log p-value:-1.379e+01
Information Content per bp:1.833
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif89.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.1 +/- 28.9bp
Average Position of motif in Background52.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGTGAGCTCA---
-ATGACGTCAYYN
 A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGTGAGCTCA---
-RTGACGTCAYCN
 A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGTGAGCTCA---
-ATGACGTCATCN
 A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGTGAGCTCA
--TRAGGTCA
 A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTGAGCTCA---
-ATGACGTCATCN
 A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGTGAGCTCA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

CRE(bZIP)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGTGAGCTCA-
CGGTGACGTCAC
 A C G T A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGTGAGCTCA-----
NATGACATCATCNNN
 A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGTGAGCTCA----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGTGAGCTCA
-GTGACCTT-
 A G T C C A T G A C G T A C T G G C T A A T C G A T G C A C G T A G T C G T C A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T