Information for 1-BGCCACCAGGGGGCGC (Motif 1)

A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C
Reverse Opposite:
A T C G G A T C C A T G T G A C A T G C G T A C A G T C A G T C C G A T T C A G A T C G G A C T A C T G A C T G G A T C T A G C
p-value:1e-214
log p-value:-4.939e+02
Information Content per bp:1.661
Number of Target Sequences with motif248.0
Percentage of Target Sequences with motif28.38%
Number of Background Sequences with motif856.7
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets51.8 +/- 17.2bp
Average Position of motif in Background49.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:BGCCACCAGGGGGCGC-----
-GCCASCAGGGGGCGCYVNNG
 A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-BGCCACCAGGGGGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-BGCCACCAGGGGGCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:BGCCACCAGGGGGCGC
DCHCAGCAGGRGGCC-
 A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:BGCCACCAGGGGGCGC----
---NNNAAGGGGGCGGGNNN
 A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:BGCCACCAGGGGGCGC
-CACAGCAGGGGG---
 A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:BGCCACCAGGGGGCGC
-CCCCCCCGGGGGNN-
 A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:BGCCACCAGGGGGCGC
NCCCCCCCGGGGGGN-
 A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:BGCCACCAGGGGGCGC
NCNCAGCGGGGGGTC-
 A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:BGCCACCAGGGGGCGC
ACCCCCCCGGGGGGN-
 A C T G C T A G T G A C A G T C C T G A T A G C A G T C G C T A A C T G T C A G C A T G T A C G A C T G G T A C C T A G T A G C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T