Information for 7-TKGKTYGGCTGMGSKG (Motif 9)

A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
Reverse Opposite:
A G T C G T A C T A C G A G T C A C G T A G T C C T G A A C T G A G T C A G T C C T A G C G T A G T A C A G T C G T C A C G T A
p-value:1e-13
log p-value:-3.040e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 20.2bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TKGKTYGGCTGMGSKG
----TWGTCTGV----
 A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TKGKTYGGCTGMGSKG
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TKGKTYGGCTGMGSKG
------NGCTN-----
 A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TKGKTYGGCTGMGSKG
-TGATTGGCTANN---
 A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TKGKTYGGCTGMGSKG
----TTGGCA------
 A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TKGKTYGGCTGMGSKG
-------GCTGTG---
 A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TKGKTYGGCTGMGSKG
--RGKGGGCGGAGC--
 A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TKGKTYGGCTGMGSKG
GTCATGCHTGRCTGS----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TKGKTYGGCTGMGSKG
---NTTGGCANN----
 A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TKGKTYGGCTGMGSKG
NGTCACGCTTGGCTGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T G A T C A C T G A C T G A G T C A G C T A C T G G T C A A C T G A T G C A C T G A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T A C G T