Information for 4-AGCGCCACCTTCTGGT (Motif 4)

T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
Reverse Opposite:
C T G A T A G C A T G C C G T A A T C G T C G A C G T A A C T G C T A G C A G T A C T G A C T G G A T C A C T G G T A C A G C T
p-value:1e-18
log p-value:-4.237e+01
Information Content per bp:1.782
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.9 +/- 18.1bp
Average Position of motif in Background28.3 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----AGCGCCACCTTCTGGT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCACCTTCTGGT--
TAGCGCCCCCTGGTGGCCA
 A C G T T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCACCTTCTGGT--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGCGCCACCTTCTGGT
NNGGCGACACCTCNNN--
 A C G T A C G T T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCACCTTCTGGT
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGCGCCACCTTCTGGT
--SNGCACCTGCHS--
 T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGCGCCACCTTCTGGT
---ACCACATCCTGT-
 T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCACCTTCTGGT
NAGCCCCGCCCCCN---
 A C G T T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCGCCACCTTCTGGT
-GCTCCGCCCMCY---
 T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCGCCACCTTCTGGT
-GCCCCGCCCCC----
 T C G A A C T G A G T C C A T G A G T C A G T C G T C A A G T C A G T C A C G T A G C T A T G C G C A T A T C G A C T G G A C T
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T