Information for 4-CGCCCTCTGGCGG (Motif 3)

A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G
Reverse Opposite:
T G A C A G T C A C T G A T G C A T G C T C G A A C T G T C G A A C T G T C A G A T C G G T A C T A C G
p-value:1e-18
log p-value:-4.245e+01
Information Content per bp:1.750
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.09%
Number of Background Sequences with motif287.9
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets46.6 +/- 26.7bp
Average Position of motif in Background49.5 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.84
Offset:-6
Orientation:forward strand
Alignment:------CGCCCTCTGGCGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CGCCCTCTGGCGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CGCCCTCTGGCGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCTCTGGCGG
NTGCCCTTGGGCGN
 A C G T A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGCCCTCTGGCGG
CGCCCCCTGACA-
 A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCTGGCGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCCCTCTGGCGG
TGCCCCCGGGCA-
 A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCCCTCTGGCGG-
CACCCCCGGGGGGG
 A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCCCTCTGGCGG--
CCCCCCCGGGGGGGT
 A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCCCTCTGGCGG
TGCCCCAGGGCA-
 A G T C C A T G A T G C A G T C G T A C A G C T A G T C A G C T T A C G A T C G T G A C T C A G A C T G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T