Information for 22-NAHCYGAYNCGKT (Motif 18)

T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T
Reverse Opposite:
G C T A T G C A A G T C C A T G A T C G C T A G C A G T G A T C C T G A C A T G C G T A A G C T A G T C
p-value:1e-3
log p-value:-8.894e+00
Information Content per bp:1.394
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.52%
Number of Background Sequences with motif1870.2
Percentage of Background Sequences with motif3.92%
Average Position of motif in Targets47.0 +/- 28.1bp
Average Position of motif in Background50.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-NAHCYGAYNCGKT-----
NCGACCGCTCCGCTCGAAA
 A C G T T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T A C G T A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--NAHCYGAYNCGKT
GWAAYHTGABMC---
 A C G T A C G T T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-NAHCYGAYNCGKT
NHAACBGYYV----
 A C G T T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:4
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:NAHCYGAYNCGKT--
---NAAACCGGTTTT
 T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

DUXA/MA0884.1/Jaspar

Match Rank:5
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:NAHCYGAYNCGKT---
---NTGATTAAATTAN
 T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:NAHCYGAYNCGKT--
----TGATTAAATTA
 T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--NAHCYGAYNCGKT
GWAAYHTGAKMC---
 A C G T A C G T T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:NAHCYGAYNCGKT
-AACCGANA----
 T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.46
Offset:-4
Orientation:forward strand
Alignment:----NAHCYGAYNCGKT
CGACCAACTGCCATGC-
 A C G T A C G T A C G T A C G T T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.46
Offset:-4
Orientation:forward strand
Alignment:----NAHCYGAYNCGKT
CGACCAACTGCCGTG--
 A C G T A C G T A C G T A C G T T C A G T C G A G C A T G T A C G A C T C T A G G T C A G A T C T A G C G T A C T C A G A C G T C G A T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T