Information for 21-GTAGCAGATGCCC (Motif 16)

A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C G T C T G A A G T C
p-value:1e-7
log p-value:-1.630e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.8 +/- 22.7bp
Average Position of motif in Background57.2 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTAGCAGATGCCC---
CTCAGCAGCTGCTACTG
 A C G T A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTAGCAGATGCCC
--AGCAGCTGCT-
 A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTAGCAGATGCCC
NNAGCAGCTGCT-
 A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTAGCAGATGCCC
VNAVCAGCTGGC-
 A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTAGCAGATGCCC
NNVVCAGCTGBN-
 A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTAGCAGATGCCC
--ANCAGCTG---
 A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTAGCAGATGCCC
NGNGACAGCTGCN-
 A C G T A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTAGCAGATGCCC
--CGCAGCTGCG-
 A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTAGCAGATGCCC
--AACAGATGGC-
 A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTAGCAGATGCCC
-SDGCAGGTGCNS
 A C T G A G C T C G T A A C T G A G T C C G T A A C T G G T C A C G A T A C T G A G T C A G T C A G T C
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C