Information for 15-SCCAGACTCCWTA (Motif 12)

T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
Reverse Opposite:
A C G T C T G A G C T A A C T G A C T G C G T A A C T G A C G T A G T C A C G T A C T G A C T G A T C G
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.7 +/- 24.1bp
Average Position of motif in Background51.0 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-SCCAGACTCCWTA---
TACGAGACTCCTCTAAC
 A C G T T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:SCCAGACTCCWTA
-CAAGACGCCTTA
 T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SCCAGACTCCWTA
-CCAGACRSVB--
 T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:SCCAGACTCCWTA
-CCAGACAG----
 T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----SCCAGACTCCWTA
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--SCCAGACTCCWTA
ATGCCAGACN-----
 A C G T A C G T T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:SCCAGACTCCWTA
-BCAGACWA----
 T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----SCCAGACTCCWTA
ATTTCCCAGVAKSCY--
 A C G T A C G T A C G T A C G T T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--SCCAGACTCCWTA
TGCCCAGNHW-----
 A C G T A C G T T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----SCCAGACTCCWTA
AGGTGHCAGACA-----
 A C G T A C G T A C G T A C G T T A G C A G T C A G T C G T C A A C T G C G T A A G T C A C G T A G T C A G T C C G A T A G C T C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T