Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-158 | -3.651e+02 | 0.0000 | 371.0 | 48.31% | 4792.1 | 10.08% | motif file (matrix) |
svg |
2 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-136 | -3.147e+02 | 0.0000 | 139.0 | 18.10% | 385.4 | 0.81% | motif file (matrix) |
svg |
3 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-131 | -3.022e+02 | 0.0000 | 328.0 | 42.71% | 4407.9 | 9.27% | motif file (matrix) |
svg |
4 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-126 | -2.911e+02 | 0.0000 | 326.0 | 42.45% | 4521.2 | 9.51% | motif file (matrix) |
svg |
5 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-123 | -2.836e+02 | 0.0000 | 239.0 | 31.12% | 2233.8 | 4.70% | motif file (matrix) |
svg |
6 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-118 | -2.719e+02 | 0.0000 | 253.0 | 32.94% | 2707.2 | 5.69% | motif file (matrix) |
svg |
7 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-96 | -2.218e+02 | 0.0000 | 192.0 | 25.00% | 1805.4 | 3.80% | motif file (matrix) |
svg |
8 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-86 | -2.001e+02 | 0.0000 | 198.0 | 25.78% | 2205.2 | 4.64% | motif file (matrix) |
svg |
9 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-49 | -1.129e+02 | 0.0000 | 148.0 | 19.27% | 2163.0 | 4.55% | motif file (matrix) |
svg |
10 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-43 | -9.907e+01 | 0.0000 | 100.0 | 13.02% | 1089.8 | 2.29% | motif file (matrix) |
svg |
11 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-37 | -8.654e+01 | 0.0000 | 74.0 | 9.64% | 651.7 | 1.37% | motif file (matrix) |
svg |
12 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-37 | -8.546e+01 | 0.0000 | 86.0 | 11.20% | 930.1 | 1.96% | motif file (matrix) |
svg |
13 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-23 | -5.487e+01 | 0.0000 | 74.0 | 9.64% | 1089.1 | 2.29% | motif file (matrix) |
svg |
14 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-20 | -4.640e+01 | 0.0000 | 73.0 | 9.51% | 1233.5 | 2.59% | motif file (matrix) |
svg |
15 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-16 | -3.892e+01 | 0.0000 | 77.0 | 10.03% | 1555.9 | 3.27% | motif file (matrix) |
svg |
16 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-12 | -2.851e+01 | 0.0000 | 41.0 | 5.34% | 649.9 | 1.37% | motif file (matrix) |
svg |
17 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.960e+01 | 0.0000 | 64.0 | 8.33% | 1763.4 | 3.71% | motif file (matrix) |
svg |
18 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-8 | -1.911e+01 | 0.0000 | 182.0 | 23.70% | 7456.1 | 15.68% | motif file (matrix) |
svg |
19 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-8 | -1.877e+01 | 0.0000 | 70.0 | 9.11% | 2056.3 | 4.32% | motif file (matrix) |
svg |
20 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-8 | -1.849e+01 | 0.0000 | 265.0 | 34.51% | 12041.3 | 25.32% | motif file (matrix) |
svg |
21 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-7 | -1.832e+01 | 0.0000 | 49.0 | 6.38% | 1219.9 | 2.57% | motif file (matrix) |
svg |
22 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-7 | -1.741e+01 | 0.0000 | 86.0 | 11.20% | 2844.1 | 5.98% | motif file (matrix) |
svg |
23 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-5 | -1.258e+01 | 0.0001 | 39.0 | 5.08% | 1068.5 | 2.25% | motif file (matrix) |
svg |
24 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.143e+01 | 0.0002 | 38.0 | 4.95% | 1082.4 | 2.28% | motif file (matrix) |
svg |
25 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-4 | -1.003e+01 | 0.0006 | 58.0 | 7.55% | 2063.1 | 4.34% | motif file (matrix) |
svg |
26 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -8.265e+00 | 0.0036 | 118.0 | 15.36% | 5314.2 | 11.18% | motif file (matrix) |
svg |
27 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-3 | -8.115e+00 | 0.0040 | 67.0 | 8.72% | 2669.3 | 5.61% | motif file (matrix) |
svg |
28 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.928e+00 | 0.0047 | 105.0 | 13.67% | 4664.0 | 9.81% | motif file (matrix) |
svg |
29 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-3 | -7.747e+00 | 0.0054 | 35.0 | 4.56% | 1162.6 | 2.44% | motif file (matrix) |
svg |
30 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.176e+00 | 0.0093 | 53.0 | 6.90% | 2063.7 | 4.34% | motif file (matrix) |
svg |
31 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.614e+00 | 0.0158 | 162.0 | 21.09% | 8019.7 | 16.86% | motif file (matrix) |
svg |
32 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -6.327e+00 | 0.0203 | 46.0 | 5.99% | 1797.2 | 3.78% | motif file (matrix) |
svg |
33 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.270e+00 | 0.0209 | 36.0 | 4.69% | 1316.2 | 2.77% | motif file (matrix) |
svg |
34 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.177e+00 | 0.0222 | 47.0 | 6.12% | 1861.2 | 3.91% | motif file (matrix) |
svg |
35 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -6.098e+00 | 0.0234 | 72.0 | 9.38% | 3154.3 | 6.63% | motif file (matrix) |
svg |
36 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.970e+00 | 0.0258 | 44.0 | 5.73% | 1732.4 | 3.64% | motif file (matrix) |
svg |
37 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -5.945e+00 | 0.0258 | 46.0 | 5.99% | 1834.6 | 3.86% | motif file (matrix) |
svg |
38 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.794e+00 | 0.0292 | 235.0 | 30.60% | 12422.4 | 26.12% | motif file (matrix) |
svg |
39 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.752e+00 | 0.0296 | 78.0 | 10.16% | 3519.0 | 7.40% | motif file (matrix) |
svg |
40 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -5.360e+00 | 0.0428 | 7.0 | 0.91% | 125.2 | 0.26% | motif file (matrix) |
svg |
41 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.238e+00 | 0.0471 | 19.0 | 2.47% | 604.5 | 1.27% | motif file (matrix) |
svg |
42 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-2 | -4.784e+00 | 0.0725 | 230.0 | 29.95% | 12386.1 | 26.05% | motif file (matrix) |
svg |
43 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-2 | -4.621e+00 | 0.0833 | 26.0 | 3.39% | 972.4 | 2.04% | motif file (matrix) |
svg |