Information for 13-GATATTTGCA (Motif 19)

A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A C G T A G T C A A C G T C G T A A C G T A G T C
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.960
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.2 +/- 25.3bp
Average Position of motif in Background62.8 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GATATTTGCA---
---ATTTGCATAA
 A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GATATTTGCA---
---ATTTGCATAT
 A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATATTTGCA---
TTCATTTGCATAT
 A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GATATTTGCA--
---ATTTGCATA
 A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GATATTTGCA--
---ATTTGCATA
 A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GATATTTGCA--
-ATATTTACATA
 A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATATTTGCA-----
TNTAATTTGCATANNN
 A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATATTTGCA-----
TNTAATTTGCATACNA
 A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATATTTGCA-----
TNTAATTTGCATACNA
 A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GATATTTGCA----
--AATTTGCATANT
 A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T